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http://bura.brunel.ac.uk/handle/2438/8913
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DC Field | Value | Language |
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dc.contributor.author | Brinkman, RR | - |
dc.contributor.author | Courtot, M | - |
dc.contributor.author | Derom, D | - |
dc.contributor.author | Fostel, JM | - |
dc.contributor.author | He, Y | - |
dc.contributor.author | Lord, P | - |
dc.contributor.author | Malone, J | - |
dc.contributor.author | Parkinson, H | - |
dc.contributor.author | Peters, B | - |
dc.contributor.author | Rocca-Serra, P | - |
dc.contributor.author | Ruttenberg, A | - |
dc.contributor.author | Sansone, S-A | - |
dc.contributor.author | Soldatova, LN | - |
dc.contributor.author | Stoeckert, CJ | - |
dc.contributor.author | Turner, JA | - |
dc.contributor.author | Zheng, J | - |
dc.date.accessioned | 2014-08-19T09:02:09Z | - |
dc.date.available | 2014-08-19T09:02:09Z | - |
dc.date.issued | 2010 | - |
dc.identifier.citation | Journal of Biomedical Semantics, 1(Suppl 1): Article no. S7, 2010 | en_US |
dc.identifier.issn | 2041-1480 | - |
dc.identifier.uri | http://www.jbiomedsem.com/content/1/S1/S7 | en |
dc.identifier.uri | http://bura.brunel.ac.uk/handle/2438/8913 | - |
dc.description | © 2010 Soldatova et al; licensee BioMed Central Ltd. This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/2.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. | en_US |
dc.description.abstract | Background: Experimental descriptions are typically stored as free text without using standardized terminology, creating challenges in comparison, reproduction and analysis. These difficulties impose limitations on data exchange and information retrieval. Results: The Ontology for Biomedical Investigations (OBI), developed as a global, cross-community effort, provides a resource that represents biomedical investigations in an explicit and integrative framework. Here we detail three real-world applications of OBI, provide detailed modeling information and explain how to use OBI. Conclusion: We demonstrate how OBI can be applied to different biomedical investigations to both facilitate interpretation of the experimental process and increase the computational processing and integration within the Semantic Web. The logical definitions of the entities involved allow computers to unambiguously understand and integrate different biological experimental processes and their relevant components. Availability: OBI is available at http://purl.obolibrary.org/obo/obi/2009-11-02/obi.owl | en_US |
dc.description.sponsorship | The National Institute of Biomedical Imaging and Bioengineering, National Human Genome Institute, the Intramural Research Program of the NIH and NIEHS, the Bio-Informatics Research Network Coordinating Center, EC FELICS, MUGEN, BBSRC, RC UK, NERC-NEBC, EU IP CarcinoGenomics, EU NoE NuGO, CARMEN project EPSRC, NERC-NEBC, EU IP CarcinoGenomics, EU NoE NuGO, the Michael Smith Foundation for Health Research, and the Public Health Agency of Canada/Canadian Institutes of Health Research Influenza Research Network. | en_US |
dc.language.iso | en | en_US |
dc.publisher | Biomed Central | en_US |
dc.subject | Ontology for Biomedical Investigations (OBI) | en_US |
dc.subject | Biomedical experiments | en_US |
dc.subject | Data exchange | en_US |
dc.subject | Data integration | en_US |
dc.subject | Semantic Web | en_US |
dc.title | Modeling biomedical experimental processes with OBI | en_US |
dc.type | Article | en_US |
dc.identifier.doi | http://dx.doi.org/10.1186/2041-1480-1-S1-S7 | - |
pubs.organisational-data | /Brunel | - |
pubs.organisational-data | /Brunel/Brunel Staff by College/Department/Division | - |
pubs.organisational-data | /Brunel/Brunel Staff by College/Department/Division/College of Engineering, Design and Physical Sciences | - |
pubs.organisational-data | /Brunel/Brunel Staff by College/Department/Division/College of Engineering, Design and Physical Sciences/Dept of Computer Science | - |
pubs.organisational-data | /Brunel/Brunel Staff by College/Department/Division/College of Engineering, Design and Physical Sciences/Dept of Computer Science/Computer Science | - |
pubs.organisational-data | /Brunel/Brunel Staff by Institute/Theme | - |
pubs.organisational-data | /Brunel/Brunel Staff by Institute/Theme/Institute of Environmental, Health and Societies | - |
pubs.organisational-data | /Brunel/Brunel Staff by Institute/Theme/Institute of Environmental, Health and Societies/Synthetic Biology | - |
pubs.organisational-data | /Brunel/University Research Centres and Groups | - |
pubs.organisational-data | /Brunel/University Research Centres and Groups/Brunel Business School - URCs and Groups | - |
pubs.organisational-data | /Brunel/University Research Centres and Groups/Brunel Business School - URCs and Groups/Centre for Research into Entrepreneurship, International Business and Innovation in Emerging Markets | - |
pubs.organisational-data | /Brunel/University Research Centres and Groups/School of Health Sciences and Social Care - URCs and Groups | - |
pubs.organisational-data | /Brunel/University Research Centres and Groups/School of Health Sciences and Social Care - URCs and Groups/Brunel Institute for Ageing Studies | - |
pubs.organisational-data | /Brunel/University Research Centres and Groups/School of Health Sciences and Social Care - URCs and Groups/Brunel Institute of Cancer Genetics and Pharmacogenomics | - |
pubs.organisational-data | /Brunel/University Research Centres and Groups/School of Health Sciences and Social Care - URCs and Groups/Centre for Systems and Synthetic Biology | - |
pubs.organisational-data | /Brunel/University Research Centres and Groups/School of Information Systems, Computing and Mathematics - URCs and Groups | - |
pubs.organisational-data | /Brunel/University Research Centres and Groups/School of Information Systems, Computing and Mathematics - URCs and Groups/Multidisclipary Assessment of Technology Centre for Healthcare (MATCH) | - |
Appears in Collections: | Computer Science Dept of Computer Science Research Papers |
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