Browsing by Author Pandini, A

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Showing results 24 to 39 of 39 < previous 
Issue DateTitleAuthor(s)
2017Ligand-induced perturbation of the HIF-2α:ARNT dimer dynamicsMinici, C; Corrada, D; Bonati, L; Pandini, A
12-Apr-2021Machine Learning Prediction of Allosteric Drug Activity from Molecular DynamicsMarchetti, F; Moroni, E; Pandini, A; Colombo, G
7-Jul-2023MDSubSampler: a posteriori sampling of important protein conformations from biomolecular simulationsOues, N; Dantu, SC; Patel, RJ; Pandini, A
2022Methodology for identifying alternative solutions in a population based data generation approach applied to synthetic biologyJayaweera, Yasoda
25-Feb-2022PathDetect-SOM: A Neural Network Approach for the Identification of Pathways in Ligand Binding SimulationsMotta, S; Callea, L; Bonati, L; Pandini, A
2015The phylogenetic signature underlying ATP synthase c-ring compliancePandini, A; Kleinjung, J; Taylor, WR; Junge, W; Khan, S
2011Predicting the accuracy of protein-ligand docking on homology modelsBordogna, A; Pandini, A; Bonati, L
1-Aug-2022Recognizing the Binding Pattern and Dissociation Pathways of the p300 Taz2-p53 TAD2 ComplexLi, T; Motta, S; Stevens, AO; Song, S; Hendrix, E; Pandini, A; He, Y
20-Mar-2021Reconstruction of ARNT PAS-B Unfolding Pathways by Steered Molecular Dynamics and Artificial Neural NetworksMotta, S; Pandini, A; Fornili, A; Bonati, L
2013Specialized dynamical properties of promiscuous residues revealed by simulated conformational ensemblesFornili, A; Pandini, A; Lu, H-C; Fraternali, F
2010Structural alphabets derived from attractors in conformational spacePandini, A; Fornili, A; Kleinjung, J
2007Structural and functional characterization of the aryl hydrocarbon receptor ligand binding domain by homology modeling and mutational analysisPandini, A; Denison, MS; Song, Y; Soshilov, AA; Bonati, L
9-Apr-2021Structural dynamics of the β-coronavirus M<sup>pro</sup> protease ligand binding sitesCho, E; Rosa, M; Anjum, R; Mehmood, S; Soban, M; Mujtaba, M; Bux, K; Dantu, S; Pandini, A; Yin, J; Ma, H; Ramanathan, A; Islam, B; Mey, ASJS; Bhowmik, D; Haider, S
11-Jun-2020Structure, Dynamics and Cellular Insight Into Novel Substrates of the Legionella pneumophila Type II Secretion SystemPortlock, TJ; Tyson, JY; Dantu, SC; Rehman, S; White, RC; McIntire, IE; Sewell, L; Richardson, K; Shaw, R; Pandini, A; Cianciotto, NP; Garnett, JA
13-Jul-2020Structure-based enzyme engineering improves donor-substrate recognition of Arabidopsis thaliana GlycosyltransferasesAkere, A; Chen, SH; Liu, X; Chen, Y; Dantu, SC; Pandini, A; Bhowmik, D; Haider, S
2016Using local states to drive the sampling of global conformations in proteinsPandini, A; Fornili, A